statistical methods for genomics
OriTer locates the putative origin and terminus of replication in the complete, unannotated
nucleotide sequence of a prokaryotic chromosome.
GenoSpex computes genomic spectra and displays the spectrograms of long nucleotide
sequences after reducing them to strings of (scalar or complex) binary digits.
CombinR2 predicts the combined (scalar) effect of two simultaneous treatments under the
Independent Effects Model (IEM) and plots response surfaces over the ranges of the
separate doses. Single
Boltzmann Explorer estimates a thermodynamic lattice model of the joint distribution of
real- or categorical-valued multivariate data, assesses lack of fit, and generates testable
predictions of desired functional relations based on the fitted model.
HelloStranger searches bacterial genomes for compositional anomalies to locate
segments that were recently acquired by horizontal transfer.
nucleotide sequence of a prokaryotic chromosome.
GenoSpex computes genomic spectra and displays the spectrograms of long nucleotide
sequences after reducing them to strings of (scalar or complex) binary digits.
CombinR2 predicts the combined (scalar) effect of two simultaneous treatments under the
Independent Effects Model (IEM) and plots response surfaces over the ranges of the
separate doses. Single
Boltzmann Explorer estimates a thermodynamic lattice model of the joint distribution of
real- or categorical-valued multivariate data, assesses lack of fit, and generates testable
predictions of desired functional relations based on the fitted model.
HelloStranger searches bacterial genomes for compositional anomalies to locate
segments that were recently acquired by horizontal transfer.
| PRODUCTS updated February 21, 2008 |
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